TESTLoc: protein subcellular localization prediction from EST data

نویسندگان
چکیده

برای دانلود رایگان متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Protein Subcellular Localization Prediction

ORGANIZATION. Section 1. We first provide the motivation for prediction of protein subcellular localization sites, as well as discuss changes being brought about by progress in proteomics. Section 2. After that, we describe the biology of protein subcellular location. In particular, we explain the principle of protein sorting signals. Section 3. Then we present several experimental techniques f...

متن کامل

Prediction of protein subcellular localization.

Because the protein's function is usually related to its subcellular localization, the ability to predict subcellular localization directly from protein sequences will be useful for inferring protein functions. Recent years have seen a surging interest in the development of novel computational tools to predict subcellular localization. At present, these approaches, based on a wide range of algo...

متن کامل

Protein Subcellular Localization Extraction and Prediction from PubMed Abstracts

Predicting protein subcellular localization is an essential step for annotating novel protein sequences. When protein sequences are deposited into UniProtKB, they are often associated with PubMed abstracts, and the abstracts can provide additional information to predict the protein subcellular localization. Our work focuses on extracting and predicting protein subcell labels from a query protei...

متن کامل

Protein Subcellular Localization Prediction for Fusarium graminearum∗

The fungal pathogen Fusarium graminearum (telomorph Gibberella zeae) is the causal agent of several destructive crop diseases. Investigating subcellular localizations of F. graminearum proteins can provide insight into pathogenic mechanisms underlying F. graminearum-host interactions. In this paper, we design a novel balanced ensemble classifier based on support vector machines (SVMs) to predic...

متن کامل

SherLoc: high-accuracy prediction of protein subcellular localization by integrating text and protein sequence data

MOTIVATION Knowing the localization of a protein within the cell helps elucidate its role in biological processes, its function and its potential as a drug target. Thus, subcellular localization prediction is an active research area. Numerous localization prediction systems are described in the literature; some focus on specific localizations or organisms, while others attempt to cover a wide r...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

ژورنال

عنوان ژورنال: BMC Bioinformatics

سال: 2010

ISSN: 1471-2105

DOI: 10.1186/1471-2105-11-563